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Intron Name: Anas_platyrhynchos_platyrhynchos_13_12571405_12573203_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12571405 - 12573203

Intron Length:

1799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TGCCTGCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATGCAT

U12 Branch Point Sequence:

AATCTCTGAGTT

Flanking Amino Acid:

SKSELVITWETVPEELQNGG

Intron Amino Acid Position:

655

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

58.4

0.21

1.3

69.4

37.7

Major PPT

67.5

0.39

0.9

57.7

38.6

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

48.9

-0

1.6

66.02

38.3

Associated Gene:

Gene:

CNTN4

Ensembl Gene ID:

ENSAPLG00000004320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004510

12566330 - 12711550

145221