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Intron Name: Anas_platyrhynchos_platyrhynchos_13_12619126_12623444_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12619126 - 12623444

Intron Length:

4319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

IFASAELSVIAVGPDFSKTL

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.6

93.2

14.5

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

97.3

1.06

0.5

96.6

11.5

Minor 5ss

43.8

-0.7

2.8

58.1

46.5

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

CNTN4

Ensembl Gene ID:

ENSAPLG00000004320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004510

12566330 - 12711550

145221