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Intron Name: Anas_platyrhynchos_platyrhynchos_13_12623575_12625006_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12623575 - 12625006

Intron Length:

1432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCACT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

ACTTCTTTATTT

Flanking Amino Acid:

LKDGEPLLPQGRVQIEQGSL

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

75.3

40.8

Major BPS

83.9

0.84

73.9

41.3

Major PPT

82.5

0.73

0.8

76.6

32.2

Minor 5ss

40.6

-1

3.2

58.1

46.3

Minor BPS

65.5

0.56

1.5

77.64

39.7

Associated Gene:

Gene:

CNTN4

Ensembl Gene ID:

ENSAPLG00000004320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004510

12566330 - 12711550

145221