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Intron Name: Anas_platyrhynchos_platyrhynchos_13_12659787_12680669_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12659787 - 12680669

Intron Length:

20883

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

TCTCTCTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTCCCTTTAAAT

Flanking Amino Acid:

VSREAKLQFAYLENFKTRTR

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

72.2

37.5

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

0.65

0.9

76.3

32.2

Minor 5ss

39.9

-1.1

2.8

57.3

39.7

Minor BPS

70.9

0.73

1.4

82.63

38.5

Associated Gene:

Gene:

CNTN4

Ensembl Gene ID:

ENSAPLG00000004320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029510

12634312 - 12711550

77239

ENSAPLT00000004510

12566330 - 12711550

145221