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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1268632_1272654_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1268632 - 1272654

Intron Length:

4023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTACTCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTTACT

Flanking Amino Acid:

ELLKTIPKYKLGIHGYAFAI

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

74.2

36.3

Major BPS

100

1.24

0.5

100

Major PPT

86.5

0.82

0.8

80.5

31.5

Minor 5ss

34.6

-1.8

2.9

44.3

43.4

Minor BPS

72.3

0.78

1.9

93.91

33.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027623

1244472 - 1422728

178257

ENSAPLT00000012856

1267770 - 1447585

179816