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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1272736_1273551_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1272736 - 1273551

Intron Length:

816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TTGTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

ATGGTTCTAAGT

Flanking Amino Acid:

MPVFSKQNETRSKGILLGVV

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

77.8

36.6

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

90.2

0.9

0.7

88.7

28.3

Minor 5ss

41.3

-1

2.8

62.9

Minor BPS

45.1

-0.2

61.69

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027623

1244472 - 1422728

178257

ENSAPLT00000012856

1267770 - 1447585

179816