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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1285294_1315605_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1285294 - 1315605

Intron Length:

30312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

TGTTGTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTGTAATGATT

Flanking Amino Acid:

VWTEAYIDSTLPQAQKLADD

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

1.1

45.2

Major BPS

90.7

1.01

0.7

19.9

Major PPT

85.2

0.79

0.9

76.9

42.1

Minor 5ss

40.7

-1

3.1

60.3

43.9

Minor BPS

47.3

-0.1

1.9

72.42

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027623

1244472 - 1422728

178257