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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13062641_13063918_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13062641 - 13063918

Intron Length:

1278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTATTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTCCTAACC

Flanking Amino Acid:

ENESEVLGYKILYRQNRHSK

Intron Amino Acid Position:

877

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

80.7

33.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.1

0.7

0.8

29.9

Minor 5ss

37.6

-1.4

50.5

Minor BPS

69.5

0.59

1.6

79.77

34.7

Associated Gene:

Gene:

CNTN6

Ensembl Gene ID:

ENSAPLG00000005639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037941

13061638 - 13174511

112874

ENSAPLT00000005886

13061638 - 13174511

112874