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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13064032_13067001_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13064032 - 13067001

Intron Length:

2970

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

CTGTTTTTTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TGTTTTTTAAAG

Flanking Amino Acid:

TPVNVTTKKSPPSQPPANIA

Intron Amino Acid Position:

839

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.2

86.9

30.1

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

76.6

0.6

77.9

34.4

Minor 5ss

37.6

-1.4

50.6

39.2

Minor BPS

66.7

0.39

1.4

68.86

38.5

Associated Gene:

Gene:

CNTN6

Ensembl Gene ID:

ENSAPLG00000005639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037941

13061638 - 13174511

112874

ENSAPLT00000005886

13061638 - 13174511

112874