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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13067189_13068507_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13067189 - 13068507

Intron Length:

1319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTGGCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

AAACAATTAATT

Flanking Amino Acid:

RLTGRVLGYEVLYWTDDPKE

Intron Amino Acid Position:

777

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

0.82

0.8

24.9

Major PPT

84.3

0.77

0.8

36.6

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

49.1

0.01

1.7

65.04

38.4

Associated Gene:

Gene:

CNTN6

Ensembl Gene ID:

ENSAPLG00000005639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037941

13061638 - 13174511

112874

ENSAPLT00000005886

13061638 - 13174511

112874