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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13068624_13069173_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13068624 - 13069173

Intron Length:

550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAAGCAC

5'SS Class:

major

3'SS Sequence:

TCCCATGACCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACAAAT

U12 Branch Point Sequence:

TCTCCCATGACC

Flanking Amino Acid:

SISIVYSGEDEPQIAPAGTS

Intron Amino Acid Position:

738

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.1

39.9

Major BPS

57.1

0.18

62.9

30.6

Major PPT

62.1

0.27

53.4

40.3

Minor 5ss

30.5

-2.2

3.4

41.5

Minor BPS

62.3

0.37

1.6

72.7

38.2

Associated Gene:

Gene:

CNTN6

Ensembl Gene ID:

ENSAPLG00000005639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005886

13061638 - 13174511

112874

ENSAPLT00000037941

13061638 - 13174511

112874