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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13069409_13072189_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13069409 - 13072189

Intron Length:

2781

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCACTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAC

U12 Branch Point Sequence:

TGCTTATTGACT

Flanking Amino Acid:

SRSELVITWEPVPEELQNGE

Intron Amino Acid Position:

660

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

87.2

27.3

Major BPS

78.7

0.71

0.9

69.3

37.7

Major PPT

77.1

0.61

0.9

69.9

35.3

Minor 5ss

38.7

-1.3

3.4

58.4

46.2

Minor BPS

61.1

0.43

1.6

76.64

39.9

Associated Gene:

Gene:

CNTN6

Ensembl Gene ID:

ENSAPLG00000005639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005886

13061638 - 13174511

112874

ENSAPLT00000037941

13061638 - 13174511

112874