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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13072261_13075163_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13072261 - 13075163

Intron Length:

2903

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACCGAT

U12 Branch Point Sequence:

GGTTGCTGCAGG

Flanking Amino Acid:

PSALLKTKAAVPVVAPTNIS

Intron Amino Acid Position:

636

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

70.6

37.9

Major BPS

49.4

-0

1.2

47.8

37.7

Major PPT

0.79

0.8

37.3

Minor 5ss

34.1

-1.8

3.1

44.9

43.1

Minor BPS

38.9

-1

2.4

45.56

46.3

Associated Gene:

Gene:

CNTN6

Ensembl Gene ID:

ENSAPLG00000005639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005886

13061638 - 13174511

112874

ENSAPLT00000037941

13061638 - 13174511

112874