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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13075314_13075405_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13075314 - 13075405

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTACTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTGACA

Flanking Amino Acid:

FSVGWQSVPTVPEVLNGRTH

Intron Amino Acid Position:

586

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

83.1

30.9

Major BPS

100

1.24

0.5

100

Major PPT

80.5

0.69

0.8

75.2

34.1

Minor 5ss

35.6

-1.6

47.8

47.9

Minor BPS

77.6

0.86

1.5

88.13

28.3

Associated Gene:

Gene:

CNTN6

Ensembl Gene ID:

ENSAPLG00000005639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037941

13061638 - 13174511

112874

ENSAPLT00000005886

13061638 - 13174511

112874