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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13077031_13082322_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13077031 - 13082322

Intron Length:

5292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTTAG

5'SS Class:

major

3'SS Sequence:

TTTGTCTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATAAAAA

Flanking Amino Acid:

ARNSGSLTVKEKTVITIPPS

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.1

67.9

39.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.72

0.8

76.7

32.1

Minor 5ss

38.5

-1.3

49.3

46.9

Minor BPS

48.9

-0

2.1

71.18

40.3

Associated Gene:

Gene:

CNTN6

Ensembl Gene ID:

ENSAPLG00000005639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037941

13061638 - 13174511

112874

ENSAPLT00000005886

13061638 - 13174511

112874