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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13082451_13097928_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13082451 - 13097928

Intron Length:

15478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGTAA

5'SS Class:

major

3'SS Sequence:

TTTGTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TCTTCTTTTTTT

Flanking Amino Acid:

KGSEVLRQNKRIVFLEDGSL

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

64.9

37.3

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

91.6

0.94

0.7

84.6

Minor 5ss

-1.7

3.4

46.8

48.5

Minor BPS

43.7

-0.4

3.6

74.98

42.6

Associated Gene:

Gene:

CNTN6

Ensembl Gene ID:

ENSAPLG00000005639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037941

13061638 - 13174511

112874

ENSAPLT00000005886

13061638 - 13174511

112874