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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13102601_13105082_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13102601 - 13105082

Intron Length:

2482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

GTATTCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TCCTGCTTAAAA

Flanking Amino Acid:

NIARGQLFVYALPEWDKKIQ

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

70.7

41.3

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

83.9

0.76

0.8

81.2

36.2

Minor 5ss

38.9

-1.2

2.8

45.8

44.3

Minor BPS

0.28

1.9

68.09

44.4

Associated Gene:

Gene:

CNTN6

Ensembl Gene ID:

ENSAPLG00000005639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005886

13061638 - 13174511

112874

ENSAPLT00000037941

13061638 - 13174511

112874