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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13105268_13113352_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13105268 - 13113352

Intron Length:

8085

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATTC

5'SS Class:

strong_major

3'SS Sequence:

TATAATTATTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TTTTCTCTAATG

Flanking Amino Acid:

SVKLECFALGNPVPSISWKR

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.4

Major BPS

0.72

78.4

31.2

Major PPT

69.7

0.44

67.2

43.3

Minor 5ss

44.2

-0.6

3.1

60.1

38.6

Minor BPS

68.1

0.43

1.7

75.83

36.2

Associated Gene:

Gene:

CNTN6

Ensembl Gene ID:

ENSAPLG00000005639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037941

13061638 - 13174511

112874

ENSAPLT00000005886

13061638 - 13174511

112874