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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13115125_13122782_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13115125 - 13122782

Intron Length:

7658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGATGA

5'SS Class:

strong_major

3'SS Sequence:

TGGTGTTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

TAATGTGTATCT

Flanking Amino Acid:

LLCGPPPHYGGLSYAWIFNN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

70.4

36.4

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

78.2

0.64

69.2

46.1

Minor 5ss

43.4

-0.7

2.8

56.4

47.7

Minor BPS

43.3

-0.4

2.4

65.43

45.2

Associated Gene:

Gene:

CNTN6

Ensembl Gene ID:

ENSAPLG00000005639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005886

13061638 - 13174511

112874

ENSAPLT00000037941

13061638 - 13174511

112874