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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1315740_1323650_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1315740 - 1323650

Intron Length:

7911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

TGGTTTATAACT

Flanking Amino Acid:

NLKWMACANKGFFTQISTLA

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

1.1

81.4

27.6

Major BPS

77.9

0.69

78.3

31.3

Major PPT

81.2

0.7

0.9

75.8

38.1

Minor 5ss

35.9

-1.6

2.6

41.2

45.2

Minor BPS

61.5

0.44

1.6

77.01

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012856

1267770 - 1447585

179816

ENSAPLT00000027623

1244472 - 1422728

178257