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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1323730_1398352_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1323730 - 1398352

Intron Length:

74623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTACG

5'SS Class:

strong_major

3'SS Sequence:

ATTGTATATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

GCAGCATTAATT

Flanking Amino Acid:

FAKYNWPDRKVRIFTYLIGR

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

78.2

36.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

74.6

0.55

71.3

42.9

Minor 5ss

37.8

-1.4

2.7

44.3

36.8

Minor BPS

54.1

0.21

1.7

66.65

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012856

1267770 - 1447585

179816

ENSAPLT00000027623

1244472 - 1422728

178257