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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13438364_13439060_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13438364 - 13439060

Intron Length:

697

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTCATGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTTTTGAACT

Flanking Amino Acid:

FEDVIETRGRAYAGIYDGIS

Intron Amino Acid Position:

1045

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

85.9

23.9

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

66.9

0.38

1.1

68.4

36.8

Minor 5ss

29.7

-2.3

39.4

46.1

Minor BPS

77.1

0.93

1.3

92.31

29.7

Associated Gene:

Gene:

CHL1

Ensembl Gene ID:

ENSAPLG00000007000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043345

13434534 - 13494505

59972

ENSAPLT00000032414

13434534 - 13494505

59972

ENSAPLT00000007294

13435352 - 13488662

53311