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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13438364_13446392_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13438364 - 13446392

Intron Length:

8029

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTTAA

5'SS Class:

major

3'SS Sequence:

CTGTTTCATGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTTTTGAACT

Flanking Amino Acid:

TEEGLTMAQGTYAGIYDGIS

Intron Amino Acid Position:

1032

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

73.9

32.9

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

66.9

0.38

1.1

68.4

36.8

Minor 5ss

40.8

-1

2.8

45.6

43.6

Minor BPS

77.1

0.93

1.3

92.31

29.7

Associated Gene:

Gene:

CHL1

Ensembl Gene ID:

ENSAPLG00000007000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044302

13434203 - 13514592

80390

ENSAPLT00000010019

13435352 - 13491138

55787