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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13439223_13446392_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13439223 - 13446392

Intron Length:

7170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTTAA

5'SS Class:

major

3'SS Sequence:

GTACATTCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

ATGACTTGAATA

Flanking Amino Acid:

TEEGLTMAQGSKGIGKISEA

Intron Amino Acid Position:

991

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

73.9

32.9

Major BPS

0.82

0.8

24.9

Major PPT

64.2

0.32

0.9

57.8

38.1

Minor 5ss

40.8

-1

2.8

45.6

43.6

Minor BPS

56.3

0.19

1.4

63.27

37.2

Associated Gene:

Gene:

CHL1

Ensembl Gene ID:

ENSAPLG00000007000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043345

13434534 - 13494505

59972

ENSAPLT00000032414

13434534 - 13494505

59972

ENSAPLT00000007294

13435352 - 13488662

53311