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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13448148_13448307_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13448148 - 13448307

Intron Length:

160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTATGAAT

5'SS Class:

major

3'SS Sequence:

AATCTCAATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TGTTATAGAAAT

Flanking Amino Acid:

RVRGHLKGYKVSWWKTKSML

Intron Amino Acid Position:

863

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.2

72.6

37.9

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

67.4

0.39

60.3

39.6

Minor 5ss

30.4

-2.2

40.5

45.3

Minor BPS

46.2

-0.2

1.9

69.48

40.5

Associated Gene:

Gene:

CHL1

Ensembl Gene ID:

ENSAPLG00000007000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032414

13434534 - 13494505

59972

ENSAPLT00000010019

13435352 - 13491138

55787

ENSAPLT00000007294

13435352 - 13488662

53311

ENSAPLT00000044302

13434203 - 13514592

80390

ENSAPLT00000043345

13434534 - 13494505

59972