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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13461164_13461603_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13461164 - 13461603

Intron Length:

440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TGGCTCTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAC

U12 Branch Point Sequence:

TTGAACTGAAAA

Flanking Amino Acid:

QWKLNGMPIDSRTFRGRISA

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

74.8

35.3

Major BPS

69.9

0.49

0.9

61.1

36.4

Major PPT

78.2

0.64

0.9

69.3

41.7

Minor 5ss

38.2

-1.3

2.7

49.5

40.3

Minor BPS

49.5

-0

1.8

63.95

41.4

Associated Gene:

Gene:

CHL1

Ensembl Gene ID:

ENSAPLG00000007000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032414

13434534 - 13494505

59972

ENSAPLT00000010019

13435352 - 13491138

55787

ENSAPLT00000007294

13435352 - 13488662

53311

ENSAPLT00000044302

13434203 - 13514592

80390

ENSAPLT00000043345

13434534 - 13494505

59972