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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13470016_13473586_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13470016 - 13473586

Intron Length:

3571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

TATTTTATTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATTTTATTT

Flanking Amino Acid:

KMPMTLKVSRSNFIKERKPK

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

67.4

43.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.8

0.76

0.8

82.6

33.4

Minor 5ss

40.4

-1.1

3.1

56.3

42.1

Minor BPS

61.8

0.45

1.6

79.69

Associated Gene:

Gene:

CHL1

Ensembl Gene ID:

ENSAPLG00000007000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032414

13434534 - 13494505

59972