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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13483683_13484698_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13483683 - 13484698

Intron Length:

1016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TGTTATTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

GTCCTCTTAACA

Flanking Amino Acid:

KCEARGNPQPTFNWTKDGKP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

1.2

84.4

33.5

Major BPS

77.1

0.67

77.9

32.2

Major PPT

87.2

0.84

0.8

84.8

35.4

Minor 5ss

39.8

-1.1

2.8

52.2

37.4

Minor BPS

71.3

0.66

1.2

73.25

38.4

Associated Gene:

Gene:

CHL1

Ensembl Gene ID:

ENSAPLG00000007000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044302

13434203 - 13514592

80390