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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13490307_13491094_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

13490307 - 13491094

Intron Length:

788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAACTTCT

5'SS Class:

weak_major

3'SS Sequence:

TTTCTCCTATCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

TTTCTCCTATCA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.5

0.29

1.3

65.7

40.8

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

82.8

0.74

0.8

82.5

27.8

Minor 5ss

54.6

0.16

2.5

78.1

35.8

Minor BPS

0.12

1.9

73.36

38.2

Associated Gene:

Gene:

CHL1

Ensembl Gene ID:

ENSAPLG00000007000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010019

13435352 - 13491138

55787