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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13587389_13593831_R

Intron Information:

Intron Rank:

149442

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13587389 - 13593831

Intron Length:

6443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

AGTTTTCTCAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TCTCACTCAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

84.1

30.2

Major BPS

0.87

0.8

85.6

Major PPT

56.9

0.16

1.7

65.3

40.6

Minor 5ss

43.3

-0.7

2.8

49.9

46.4

Minor BPS

54.1

0.13

1.7

66.28

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033998

13587086 - 13623350

36265

ENSAPLT00000031294

13587086 - 13598975

11890