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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13810542_13830740_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

13810542 - 13830740

Intron Length:

20199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTCTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTCTCTTAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.6

32.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.3

0.64

0.9

73.9

34.8

Minor 5ss

27.4

-2.6

2.9

31.8

42.6

Minor BPS

79.5

0.92

1.1

83.19

30.2

Associated Gene:

Gene:

CNTN3

Ensembl Gene ID:

ENSAPLG00000009693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040260

13810095 - 13904341

94247