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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13867590_13868601_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13867590 - 13868601

Intron Length:

1012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

GTCTTGTATTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

GTTTACTTAAGT

Flanking Amino Acid:

TVKLECFALGNPVPQINWRR

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

27.2

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

71.7

0.49

69.9

40.6

Minor 5ss

44.5

-0.6

2.8

38.4

Minor BPS

68.9

0.67

1.8

39.7

Associated Gene:

Gene:

CNTN3

Ensembl Gene ID:

ENSAPLG00000009693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040260

13810095 - 13904341

94247

ENSAPLT00000010136

13820018 - 13904341

84324