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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13877682_13879957_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13877682 - 13879957

Intron Length:

2276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACATTC

5'SS Class:

major

3'SS Sequence:

TCTTAATATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTTTCTTAATA

Flanking Amino Acid:

LKNGEQLSIEGRIQIENGAL

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

1.1

75.9

34.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

77.2

0.61

0.9

74.5

39.2

Minor 5ss

-0.2

2.9

68.1

42.9

Minor BPS

87.5

1.17

0.8

90.77

23.3

Associated Gene:

Gene:

CNTN3

Ensembl Gene ID:

ENSAPLG00000009693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040260

13810095 - 13904341

94247

ENSAPLT00000010136

13820018 - 13904341

84324