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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13880088_13881358_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13880088 - 13881358

Intron Length:

1271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTGTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

CTTTATTTCACT

Flanking Amino Acid:

ISSSAELRVVASAPDFSKNP

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

81.4

0.71

0.8

80.3

31.8

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

59.2

0.37

80.33

41.9

Associated Gene:

Gene:

CNTN3

Ensembl Gene ID:

ENSAPLG00000009693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010136

13820018 - 13904341

84324

ENSAPLT00000040260

13810095 - 13904341

94247