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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13881510_13888465_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13881510 - 13888465

Intron Length:

6956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTAAGT

5'SS Class:

major

3'SS Sequence:

AAATCTCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTCTTTTAAAA

Flanking Amino Acid:

KGGEQLHENERITFLKDGGL

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

40.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

74.9

0.56

0.9

70.7

39.9

Minor 5ss

41.4

-1

2.9

58.6

45.5

Minor BPS

63.5

0.42

1.3

70.55

Associated Gene:

Gene:

CNTN3

Ensembl Gene ID:

ENSAPLG00000009693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010136

13820018 - 13904341

84324

ENSAPLT00000040260

13810095 - 13904341

94247