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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13888594_13889989_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13888594 - 13889989

Intron Length:

1396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

AATCCAATAACT

Flanking Amino Acid:

ASGTTNLIVTEPTRITLAPS

Intron Amino Acid Position:

436

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.4

38.7

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

70.7

0.47

0.9

65.8

34.7

Minor 5ss

25.2

-2.9

3.2

43.6

Minor BPS

54.8

0.23

1.9

76.29

Associated Gene:

Gene:

CNTN3

Ensembl Gene ID:

ENSAPLG00000009693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040260

13810095 - 13904341

94247

ENSAPLT00000010136

13820018 - 13904341

84324