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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13894586_13894667_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13894586 - 13894667

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACAC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTTAATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATCAT

U12 Branch Point Sequence:

CTCTTTTTAATA

Flanking Amino Acid:

FSVGWQRVTTVPDVIDGKTF

Intron Amino Acid Position:

587

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

68.4

36.7

Major BPS

66.8

0.42

1.1

37.7

Major PPT

78.8

0.65

0.8

76.6

30.6

Minor 5ss

31.6

-2.1

3.2

41.7

Minor BPS

68.4

0.57

1.2

69.67

37.9

Associated Gene:

Gene:

CNTN3

Ensembl Gene ID:

ENSAPLG00000009693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040260

13810095 - 13904341

94247

ENSAPLT00000010136

13820018 - 13904341

84324