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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13894818_13895535_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13894818 - 13895535

Intron Length:

718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATCTAT

U12 Branch Point Sequence:

TTCTTTTTCACA

Flanking Amino Acid:

PSEKVRTEEAVPEIPPSEVS

Intron Amino Acid Position:

637

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.1

68.2

42.9

Major BPS

0.4

1.3

64.8

42.4

Major PPT

90.3

0.91

0.6

86.8

24.1

Minor 5ss

28.4

-2.5

2.9

32.7

Minor BPS

62.5

0.39

1.7

73.92

38.7

Associated Gene:

Gene:

CNTN3

Ensembl Gene ID:

ENSAPLG00000009693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010136

13820018 - 13904341

84324

ENSAPLT00000040260

13810095 - 13904341

94247