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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13896706_13896852_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13896706 - 13896852

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTCCCATTACA

Flanking Amino Acid:

SVTTVFSAEEEPTVAPAGVS

Intron Amino Acid Position:

739

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

77.9

36.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

83.6

0.76

0.8

77.3

29.9

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

60.8

0.33

1.9

78.64

36.9

Associated Gene:

Gene:

CNTN3

Ensembl Gene ID:

ENSAPLG00000009693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040260

13810095 - 13904341

94247

ENSAPLT00000010136

13820018 - 13904341

84324