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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13896969_13897644_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13896969 - 13897644

Intron Length:

676

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTCA

5'SS Class:

strong_major

3'SS Sequence:

TTGTATCTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AACATTTTAAAT

Flanking Amino Acid:

MSSGRLLGYEVRYWNNGGKE

Intron Amino Acid Position:

778

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.1

28.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

70.1

0.45

63.9

42.4

Minor 5ss

39.8

-1.1

2.8

50.7

45.7

Minor BPS

54.4

0.22

1.4

65.05

39.3

Associated Gene:

Gene:

CNTN3

Ensembl Gene ID:

ENSAPLG00000009693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010136

13820018 - 13904341

84324

ENSAPLT00000040260

13810095 - 13904341

94247