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Intron Name: Anas_platyrhynchos_platyrhynchos_13_13900446_13902251_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13900446 - 13902251

Intron Length:

1806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

CTTTGCAAAAGA

Flanking Amino Acid:

ENESEVTGYKVLYRTSSQTN

Intron Amino Acid Position:

878

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

85.7

0.8

0.9

80.6

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

42.2

-0.5

2.4

59.46

46.4

Associated Gene:

Gene:

CNTN3

Ensembl Gene ID:

ENSAPLG00000009693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040260

13810095 - 13904341

94247

ENSAPLT00000010136

13820018 - 13904341

84324