Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_14058477_14059532_F

Intron Information:

Intron Rank:

137320

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14058477 - 14059532

Intron Length:

1056

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTAAGTGGG

5'SS Class:

major

3'SS Sequence:

TTGCACTAGGTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTCTTGCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

44.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

58.4

0.19

1.1

55.3

40.1

Minor 5ss

34.1

-1.8

3.2

45.3

Minor BPS

65.7

0.58

1.9

88.65

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026190

14057908 - 14059741

1834