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Intron Name: Anas_platyrhynchos_platyrhynchos_13_14079970_14082488_R

Intron Information:

Intron Rank:

138432

Intron Class:

major

Intron Phase:

Intron Coordinates:

14079970 - 14082488

Intron Length:

2519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGGTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAA

U12 Branch Point Sequence:

AGGTTTGAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.4

32.7

Major BPS

65.4

0.38

1.4

75.9

36.3

Major PPT

81.8

0.71

0.9

72.6

42.4

Minor 5ss

-2.1

3.1

39.6

46.4

Minor BPS

44.5

-0.3

2.2

61.74

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022002

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046792

14079543 - 14084168

4626