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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1415034_1422638_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1415034 - 1422638

Intron Length:

7605

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTGTC

5'SS Class:

major

3'SS Sequence:

TTTCTCTTTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCTCTTTATA

Flanking Amino Acid:

GDDDFFNIIAYNEELHYVEP

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.1

69.1

35.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

88.3

0.86

0.6

84.3

23.8

Minor 5ss

34.7

-1.7

3.4

53.4

43.8

Minor BPS

64.6

0.45

1.6

76.23

34.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027623

1244472 - 1422728

178257

ENSAPLT00000012856

1267770 - 1447585

179816