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Intron Name: Anas_platyrhynchos_platyrhynchos_13_14194647_14197070_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14194647 - 14197070

Intron Length:

2424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

CTATCCTAAAAC

Flanking Amino Acid:

SVLDPYLLPEDHPSVHEYYD

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

75.1

35.1

Major BPS

72.7

0.57

72.1

31.1

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

37.3

-1.4

2.7

42.3

38.4

Minor BPS

59.3

0.27

1.8

68.43

42.8

Associated Gene:

Gene:

PDZRN3

Ensembl Gene ID:

ENSAPLG00000014073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014673

14180850 - 14209723

28874