Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_14226717_14251021_R

Intron Information:

Intron Rank:

137316

Intron Class:

major

Intron Phase:

Intron Coordinates:

14226717 - 14251021

Intron Length:

24305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTGGA

5'SS Class:

major

3'SS Sequence:

TTTTCTTATGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTTCTTATGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.3

72.4

39.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

84.5

0.78

0.8

81.9

28.9

Minor 5ss

33.4

-1.9

3.2

39.3

39.8

Minor BPS

66.5

0.6

1.9

87.15

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023412

14225698 - 14266275

40578