Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_14274554_14275134_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14274554 - 14275134

Intron Length:

581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTCAC

5'SS Class:

major

3'SS Sequence:

TCGCTGTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

ACTGCCCTAGTA

Flanking Amino Acid:

RQHCTEEEEEESFMSPRNSG

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

66.9

38.5

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

73.3

0.52

0.9

65.1

41.2

Minor 5ss

40.7

-1

2.8

52.9

44.2

Minor BPS

46.8

-0.2

58.14

41.9

Associated Gene:

Gene:

PPP4R2

Ensembl Gene ID:

ENSAPLG00000014045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042257

14274147 - 14299540

25394

ENSAPLT00000023263

14274147 - 14299540

25394

ENSAPLT00000014636

14274147 - 14299781

25635