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Intron Name: Anas_platyrhynchos_platyrhynchos_13_14275193_14275309_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14275193 - 14275309

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAAGA

5'SS Class:

strong_major

3'SS Sequence:

CTCTACATCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

ACATCCTCTACA

Flanking Amino Acid:

DDPAEAEEHEDKEKDATCAR

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

74.1

36.4

Major BPS

70.2

0.5

1.1

77.2

Major PPT

73.1

0.52

0.9

69.7

34.9

Minor 5ss

32.2

-2

40.7

45.1

Minor BPS

52.5

0.07

1.9

62.96

43.1

Associated Gene:

Gene:

PPP4R2

Ensembl Gene ID:

ENSAPLG00000014045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023263

14274147 - 14299540

25394