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Intron Name: Anas_platyrhynchos_platyrhynchos_13_14275404_14276004_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14275404 - 14276004

Intron Length:

601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTGAG

5'SS Class:

major

3'SS Sequence:

TTGTTGTTTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAGAA

U12 Branch Point Sequence:

TTGTTGTTTATA

Flanking Amino Acid:

SLQQTDDKKHSESPASESEG

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

1.2

66.1

39.4

Major BPS

46.7

-0.2

0.9

39.1

Major PPT

81.3

0.7

0.9

76.5

37.7

Minor 5ss

34.5

-1.8

2.9

40.4

45.9

Minor BPS

48.2

-0.1

2.3

65.88

41.1

Associated Gene:

Gene:

PPP4R2

Ensembl Gene ID:

ENSAPLG00000014045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042257

14274147 - 14299540

25394

ENSAPLT00000023263

14274147 - 14299540

25394

ENSAPLT00000014636

14274147 - 14299781

25635