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Intron Name: Anas_platyrhynchos_platyrhynchos_13_14276149_14276561_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14276149 - 14276561

Intron Length:

413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

ACTTTTTTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TTGTTATTAACT

Flanking Amino Acid:

FPGNSPGYSDRSNVNGPGTP

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.6

93.2

14.5

Major BPS

81.9

0.79

0.8

81.9

Major PPT

77.5

0.62

78.4

33.3

Minor 5ss

43.8

-0.7

2.8

58.1

46.5

Minor BPS

74.1

0.84

1.5

88.76

35.9

Associated Gene:

Gene:

PPP4R2

Ensembl Gene ID:

ENSAPLG00000014045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042257

14274147 - 14299540

25394

ENSAPLT00000023263

14274147 - 14299540

25394

ENSAPLT00000014636

14274147 - 14299781

25635